Publications¶
DIALS Journal Articles¶
- Gildea RJ, Beilsten-Edmands J, Axford D, Horrell S, Aller P, Sandy J, Sanchez-Weatherby J, Owen CD, Lukacik P, Strain-Damerell C, Owen RL, Walsh MA, Winter G.Acta Crystallogr D Struct Biol 78, 752-769 (01 Jun 2022). [PMID:35647922] [PMC reprint: PMC9159281]
- Winter G, Beilsten-Edmands J, Devenish N, Gerstel M, Gildea RJ, McDonagh D, Pascal E, Waterman DG, Williams BH, Evans G.Protein Sci 31, 232-250 (1 Jan 2022). [PMID:34747533] [PMC reprint: PMC8740827]
- Beilsten-Edmands J, Winter G, Gildea R, Parkhurst J, Waterman D, Evans G.Acta Crystallogr D Struct Biol 76, 385-399 (01 Apr 2020). [PMID:32254063] [PMC reprint: PMC7137103]
- Winter G, Gildea RJ, Paterson NG, Beale J, Gerstel M, Axford D, Vollmar M, McAuley KE, Owen RL, Flaig R, Ashton AW, Hall DR.Acta Crystallogr D Struct Biol 75, 242-261 (01 Mar 2019). [PMID:30950396] [PMC reprint: PMC6450062]
- Brewster AS, Waterman DG, Parkhurst JM, Gildea RJ, Young ID, O’Riordan LJ, Yano J, Winter G, Evans G, Sauter NK.Acta Crystallogr D Struct Biol 74, 877-894 (01 Sep 2018). [PMID:30198898] [PMC reprint: PMC6130462]
- Clabbers MTB, Gruene T, Parkhurst JM, Abrahams JP, Waterman DG.Acta Crystallogr D Struct Biol 74, 506-518 (01 Jun 2018). [PMID:29872002] [PMC reprint: PMC6096487]
Data and processing instructions associated with this paper can be found here.
- Gildea RJ, Winter G.Acta Crystallogr D Struct Biol 74, 405-410 (01 May 2018). [PMID:29717711] [PMC reprint: PMC5930348]
- Winter G, Waterman DG, Parkhurst JM, Brewster AS, Gildea RJ, Gerstel M, Fuentes-Montero L, Vollmar M, Michels-Clark T, Young ID, Sauter NK, Evans G.Acta Crystallogr D Struct Biol 74, 85-97 (01 Feb 2018). [PMID:29533234] [PMC reprint: PMC5947772]
- Parkhurst JM, Thorn A, Vollmar M, Winter G, Waterman DG, Fuentes-Montero L, Gildea RJ, Murshudov GN, Evans G.IUCrJ 4, 626-638 (01 Sep 2017). [PMID:28989718] [PMC reprint: PMC5619854]
- Parkhurst JM, Winter G, Waterman DG, Fuentes-Montero L, Gildea RJ, Murshudov GN, Evans G.J Appl Crystallogr 49, 1912-1921 (01 Dec 2016). [PMID:27980508] [PMC reprint: PMC5139990]
- Waterman DG, Winter G, Gildea RJ, Parkhurst JM, Brewster AS, Sauter NK, Evans G.Acta Crystallogr D Struct Biol 72, 558-75 (1 Apr 2016). [PMID:27050135] [PMC reprint: PMC4822564]
- Gildea RJ, Waterman DG, Parkhurst JM, Axford D, Sutton G, Stuart DI, Sauter NK, Evans G, Winter G.Acta Crystallogr D Biol Crystallogr 70, 2652-66 (1 Oct 2014). [PMID:25286849] [PMC reprint: PMC4188007]
- Parkhurst JM, Brewster AS, Fuentes-Montero L, Waterman DG, Hattne J, Ashton AW, Echols N, Evans G, Sauter NK, Winter G.J Appl Crystallogr 47, 1459-1465 (01 Aug 2014). [PMID:25242914] [PMC reprint: PMC4119952]
- Wall ME, Adams PD, Fraser JS, Sauter NK.Structure 22, 182-4 (04 Feb 2014). [PMID:24507780] [PMC reprint: PMC4070675] (Reprint)
- Sauter NK, Hattne J, Grosse-Kunstleve RW, Echols N.Acta Crystallogr D Biol Crystallogr 69, 1274-82 (1 Jul 2013). [PMID:23793153] [PMC reprint: PMC3689530]
- Grosse-Kunstleve RW, Terwilliger TC, Sauter NK, Adams PD.Source Code Biol Med 7, 5 (28 May 2012). [PMID:22640868] [PMC reprint: PMC3448510]
DIALS Application to XFEL Crystallography¶
- Rodriguez JA, Ivanova MI, Sawaya MR, Cascio D, Reyes FE, Shi D, Sangwan S, Guenther EL, Johnson LM, Zhang M, Jiang L, Arbing MA, Nannenga BL, Hattne J, Whitelegge J, Brewster AS, Messerschmidt M, Boutet S, Sauter NK, Gonen T, Eisenberg DS.Nature 525, 486-90 (24 Sep 2015). [PMID:26352473] [PMC reprint: PMC4791177]
- Zhou Q, Lai Y, Bacaj T, Zhao M, Lyubimov AY, Uervirojnangkoorn M, Zeldin OB, Brewster AS, Sauter NK, Cohen AE, Soltis SM, Alonso-Mori R, Chollet M, Lemke HT, Pfuetzner RA, Choi UB, Weis WI, Diao J, Südhof TC, Brunger AT.Nature 525, 62-7 (03 Sep 2015). [PMID:26280336] [PMC reprint: PMC4607316]
- Ginn HM, Brewster AS, Hattne J, Evans G, Wagner A, Grimes JM, Sauter NK, Sutton G, Stuart DI.Acta Crystallogr D Biol Crystallogr 71, 1400-10 (1 Jun 2015). [PMID:26057680] [PMC reprint: PMC4461207]
- Uervirojnangkoorn M, Zeldin OB, Lyubimov AY, Hattne J, Brewster AS, Sauter NK, Brunger AT, Weis WI.Elife 4 (17 Mar 2015). [PMID:25781634] [PMC reprint: PMC4397907]
- Ginn HM, Messerschmidt M, Ji X, Zhang H, Axford D, Gildea RJ, Winter G, Brewster AS, Hattne J, Wagner A, Grimes JM, Evans G, Sauter NK, Sutton G, Stuart DI.Nat Commun 6, 6435 (09 Mar 2015). [PMID:25751308] [PMC reprint: PMC4403592]
- Sauter NK.J Synchrotron Radiat 22, 239-48 (1 Mar 2015). [PMID:25723925] [PMC reprint: PMC4344359]
- Brewster AS, Sawaya MR, Rodriguez J, Hattne J, Echols N, McFarlane HT, Cascio D, Adams PD, Eisenberg DS, Sauter NK.Acta Crystallogr D Biol Crystallogr 71, 357-66 (1 Feb 2015). [PMID:25664747] [PMC reprint: PMC4321489]
- Zeldin OB, Brewster AS, Hattne J, Uervirojnangkoorn M, Lyubimov AY, Zhou Q, Zhao M, Weis WI, Sauter NK, Brunger AT.Acta Crystallogr D Biol Crystallogr 71, 352-6 (1 Feb 2015). [PMID:25664746] [PMC reprint: PMC4321488]
- Sauter NK, Hattne J, Brewster AS, Echols N, Zwart PH, Adams PD.Acta Crystallogr D Biol Crystallogr 70, 3299-309 (01 Dec 2014). [PMID:25478847] [PMC reprint: PMC4257623] (Reprint)
- Cohen AE, Soltis SM, González A, Aguila L, Alonso-Mori R, Barnes CO, Baxter EL, Brehmer W, Brewster AS, Brunger AT, Calero G, Chang JF, Chollet M, Ehrensberger P, Eriksson TL, Feng Y, Hattne J, Hedman B, Hollenbeck M, Holton JM, Keable S, Kobilka BK, Kovaleva EG, Kruse AC, Lemke HT, Lin G, Lyubimov AY, Manglik A, Mathews II, McPhillips SE, Nelson S, Peters JW, Sauter NK, Smith CA, Song J, Stevenson HP, Tsai Y, Uervirojnangkoorn M, Vinetsky V, Wakatsuki S, Weis WI, Zadvornyy OA, Zeldin OB, Zhu D, Hodgson KO.Proc Natl Acad Sci U S A 111, 17122-7 (02 Dec 2014). [PMID:25362050] [PMC reprint: PMC4260607]
- Sawaya MR, Cascio D, Gingery M, Rodriguez J, Goldschmidt L, Colletier JP, Messerschmidt MM, Boutet S, Koglin JE, Williams GJ, Brewster AS, Nass K, Hattne J, Botha S, Doak RB, Shoeman RL, DePonte DP, Park HW, Federici BA, Sauter NK, Schlichting I, Eisenberg DS.Proc Natl Acad Sci U S A 111, 12769-74 (02 Sep 2014). [PMID:25136092] [PMC reprint: PMC4156696]
- Kern J, Hattne J, Tran R, Alonso-Mori R, Laksmono H, Gul S, Sierra RG, Rehanek J, Erko A, Mitzner R, Wernet P, Bergmann U, Sauter NK, Yachandra V, Yano J.Philos Trans R Soc Lond B Biol Sci 369, 20130590 (17 Jul 2014). [PMID:24914169] [PMC reprint: PMC4052878]
- Tran R, Kern J, Hattne J, Koroidov S, Hellmich J, Alonso-Mori R, Sauter NK, Bergmann U, Messinger J, Zouni A, Yano J, Yachandra VK.Philos Trans R Soc Lond B Biol Sci 369, 20130324 (17 Jul 2014). [PMID:24914152] [PMC reprint: PMC4052861]
- Kern J, Tran R, Alonso-Mori R, Koroidov S, Echols N, Hattne J, Ibrahim M, Gul S, Laksmono H, Sierra RG, Gildea RJ, Han G, Hellmich J, Lassalle-Kaiser B, Chatterjee R, Brewster AS, Stan CA, Glöckner C, Lampe A, DiFiore D, Milathianaki D, Fry AR, Seibert MM, Koglin JE, Gallo E, Uhlig J, Sokaras D, Weng TC, Zwart PH, Skinner DE, Bogan MJ, Messerschmidt M, Glatzel P, Williams GJ, Boutet S, Adams PD, Zouni A, Messinger J, Sauter NK, Bergmann U, Yano J, Yachandra VK.Nat Commun 5, 4371 (09 Jul 2014). [PMID:25006873] [PMC reprint: PMC4151126]
- Hattne J, Echols N, Tran R, Kern J, Gildea RJ, Brewster AS, Alonso-Mori R, Glöckner C, Hellmich J, Laksmono H, Sierra RG, Lassalle-Kaiser B, Lampe A, Han G, Gul S, DiFiore D, Milathianaki D, Fry AR, Miahnahri A, White WE, Schafer DW, Seibert MM, Koglin JE, Sokaras D, Weng TC, Sellberg J, Latimer MJ, Glatzel P, Zwart PH, Grosse-Kunstleve RW, Bogan MJ, Messerschmidt M, Williams GJ, Boutet S, Messinger J, Zouni A, Yano J, Bergmann U, Yachandra VK, Adams PD, Sauter NK.Nat Methods 11, 545-8 (1 May 2014). [PMID:24633409] [PMC reprint: PMC4008696]
- Kern J, Alonso-Mori R, Tran R, Hattne J, Gildea RJ, Echols N, Glöckner C, Hellmich J, Laksmono H, Sierra RG, Lassalle-Kaiser B, Koroidov S, Lampe A, Han G, Gul S, Difiore D, Milathianaki D, Fry AR, Miahnahri A, Schafer DW, Messerschmidt M, Seibert MM, Koglin JE, Sokaras D, Weng TC, Sellberg J, Latimer MJ, Grosse-Kunstleve RW, Zwart PH, White WE, Glatzel P, Adams PD, Bogan MJ, Williams GJ, Boutet S, Messinger J, Zouni A, Sauter NK, Yachandra VK, Bergmann U, Yano J.Science 340, 491-5 (26 Apr 2013). [PMID:23413188] [PMC reprint: PMC3732582]
- Kern J, Alonso-Mori R, Hellmich J, Tran R, Hattne J, Laksmono H, Glöckner C, Echols N, Sierra RG, Sellberg J, Lassalle-Kaiser B, Gildea RJ, Glatzel P, Grosse-Kunstleve RW, Latimer MJ, McQueen TA, DiFiore D, Fry AR, Messerschmidt M, Miahnahri A, Schafer DW, Seibert MM, Sokaras D, Weng TC, Zwart PH, White WE, Adams PD, Bogan MJ, Boutet S, Williams GJ, Messinger J, Sauter NK, Zouni A, Bergmann U, Yano J, Yachandra VK.Proc Natl Acad Sci U S A 109, 9721-6 (19 Jun 2012). [PMID:22665786] [PMC reprint: PMC3382516]
DIALS Synchrotron Applications¶
- Wall ME, Van Benschoten AH, Sauter NK, Adams PD, Fraser JS, Terwilliger TC.Proc Natl Acad Sci U S A 111, 17887-92 (16 Dec 2014). [PMID:25453071] [PMC reprint: PMC4273327]
- Pothineni SB, Venugopalan N, Ogata CM, Hilgart MC, Stepanov S, Sanishvili R, Becker M, Winter G, Sauter NK, Smith JL, Fischetti RF.J Appl Crystallogr 47, 1992-1999 (01 Dec 2014). [PMID:25484844] [PMC reprint: PMC4248568] (Reprint)
DIALS Reports¶
- DIALS Framework Report
The requirements for and the design of the DIALS framework is described in this report, submitted as the first project deliverable for the BioStruct-X 18 month report.