dxtbx.serialize¶
- dxtbx.serialize.imageset.basic_imageset_from_dict(d, directory=None)[source]¶
Construct an ImageSet class from the dictionary.
- dxtbx.serialize.imageset.basic_imageset_to_dict(imageset)[source]¶
Convert an imageset to a dictionary
- Params:
imageset The imageset
- Returns:
A dictionary of the parameters
- dxtbx.serialize.imageset.filename_to_absolute(filename)[source]¶
Convert filenames to absolute form.
- dxtbx.serialize.imageset.imagesequence_from_dict(d, check_format=True, directory=None)[source]¶
Construct and image sequence from the dictionary.
- dxtbx.serialize.imageset.imagesequence_to_dict(sequence)[source]¶
Convert a sequence to a dictionary
- Params:
sequence The sequence
- Returns:
A dictionary of the parameters
- dxtbx.serialize.imageset.imageset_from_dict(d, check_format=True, directory=None)[source]¶
Convert the dictionary to a sequence
- Params:
d The dictionary of parameters
- Returns:
The sequence
- dxtbx.serialize.imageset.imageset_to_dict(imageset)[source]¶
Convert the imageset to a dictionary
- Params:
imageset The imageset
- Returns:
A dictionary of the parameters
- dxtbx.serialize.load.crystal(infile)[source]¶
Load the given JSON file.
- Params:
infile The input filename or file object
- Returns:
The models
- dxtbx.serialize.load.experiment_list(infile, check_format=True)[source]¶
Load an experiment list from a serialized format.
- dxtbx.serialize.load.imageset(filename)[source]¶
Load the given JSON file.
- Params:
infile The input filename
- Returns:
The models
- dxtbx.serialize.xds.to_crystal(filename)[source]¶
Get the crystal model from the xparm file
- Params:
filename The xparm/or integrate filename
- Returns:
The crystal model
- dxtbx.serialize.xds.to_imageset(input_filename, extra_filename=None)[source]¶
Get an image set from the xds input filename plus an extra filename
- Params:
input_filename The XDS.INP file extra_filename A (G)XPARM.XDS, INTGRATE.HKL or XDS_ASCII.HKL file
- Returns:
The imageset
